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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … yields and improving their abilities to adapt to extreme environments such as poor soils and drought. The reference … and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department of Energy …
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MGM Workshop at Fisabio Summer School 2025
… research, the health sciences and related fields who are interested in learning and sharing concepts, tools and research results … will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by …
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Methane Makers in Yosemite’s Lakes
… and met local wildlife (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … a way to access much more information about fungi in these environments. “Now with these new tools — … of these varied biomes; the forests share only about 20% of their fungal species. To make useful comparisons, the …
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JGI on the 2020 Highly Cited Researchers List
Congratulations to the 2020 Highly Cited Researchers at the JGI! They are among … those recognized by Clarivate Analytics as “true pioneers in their fields over the last decade, demonstrated by the … that led to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a … Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first …
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JGIota: Looking Back at Methane-Making Microbes
We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: … bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial methane-makers. Eventually, that could help us …
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JGI@25: Fueling Investigation into Methane-Making Microbes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using microbial understanding to formulate a vaccine for …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The … ensuring genes vital for growth and survival across various environments are expressed when their functions are needed. … efficacy of RIViT-seq, researchers recently characterized 12 sigma factors and were able to identify the associated …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help … determine if these fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can … Office of Science of the U.S. DOE under Contract No. DE-AC02-05CH11231 within the framework of CSP 1974 “1KFG: …
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