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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit white papers … exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the … and its applications. “I moved to UC Davis in 2014,” recalled Philipp Zerbe of the University of California, …
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Emiley Eloe-Fadrosh
… research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … National Microbiome Data Collaborative (NMDC). … Emiley Eloe-Fadrosh is the Metagenome Science Program Head at … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam removal to Antarctica’s … efforts in metabolic engineering and biocatalyst design will target sustainable energy solutions, focusing on …
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An Automated Tool for Assessing Virus Data Quality
… can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … often results in highly fragmented data, which limits the ability of researchers to accurately perform functional … based on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both …
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … Darcy McRose, Ranjani Murali, Ernie Osburn, Ravikumar Patel, Guy Polturak, Marlis Reich, Taniya RoyChowdhury and …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a … traits — height, biomass, hardiness to cold, etc. — to its genes. The undertaking took shovels, trucks — and more than …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we … her JGI DNA synthesis project to explore the chemical capabilities of flavin monooxygenases, and more broadly about the … So I would say we run enzymatic reactions anywhere from 4 degrees to room temperature, to slightly elevated. We …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State …
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Introducing New Members of the JGI User Executive Committee
… new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other … to serve on the UEC. For microbial ecologist Gilbert at the University of California (UC) San Diego, being on the … user bottlenecks in access, analysis and sharing of JGI-generated data. She is also interested in reaching and …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate … JGI mentors, what challenges they overcame, and what new skill sets they look forward to taking back to school.  The …
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Refining the Process of Identifying Algae Biotechnology Candidates
… place these algae in a container with access to sunlight, water and carbon dioxide so they can grow, and then harvest … enough algal biomass to yield the equivalent of 10-27 billion gasoline gallons if target yields could be achieved. … that simulated summer in Arizona. Scenedesmus  sp. NREL 46B-D3, which thrives both in saltwater and wastewater, was …
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