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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a … methylation of the base cytosine at the 5th position on its carbon ring, or 5mC. In many organisms, 5mC is an important … The work conducted by the US Department of Energy Joint Genome …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal … able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have … how mycorrhizal fungi play an integral role in soil carbon storage. Summary There are three types of fungal …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the … among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields … a series of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local … at three DOE Bioenergy Research Centers (BRCs)—the  Great Lakes Bioenergy Research Center (GLBRC) , the  Center for … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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The Soil Blooms Green
… Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might be quietly improving the soil. Penn State researchers Mary Ann Bruns and …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His research activity is focused on developing and implementing new technologies and … BS, Engineering, Tokyo Institute of Technology Master's, …
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been … of Microbiology (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 nominees. The … National Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single …
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MGM Workshop at Fisabio Summer School 2025
… here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning and sharing concepts, tools and … will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by …
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The Mobilome in the Mire
… have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into light, and opening up new options for engineering these microbes in the future. Join Sarah …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the …
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Refining the Process of Identifying Algae Biotechnology Candidates
… to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they can grow, and then harvest for use as … NL0032266. This work was also completed in part by the National Renewable Energy Laboratory, operated by Alliance for …
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