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NeLLi — Symposium on New Lineages of Life
Schulz,  New Lineages of Life Lead Emiley Eloe-Fadrosh, Metagenome Program Tanja Woyke, Microbial Program Robert …
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Katherine Louie
… spectrometry workflows for polar and nonpolar metabolite analysis, creation of large metabolite databases by running … reservoir of natural products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards … microbiome in maize (Zea mays). Scientific Reports. 2021. doi:10.1038/s41598-020-79320-z 3. Louie KB, Kosina SM, …
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The Earth BioGenome Project 2020: Starting the clock
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… a virtual four-day data carpentry workshop for the incoming 2021 JGI-UC Merced interns to help familiarize incoming … Relevant Links: Publication: Wint R et al. Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals …
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John Vogel
… mutant collections, transformation technology, epigenetic analysis techniques) and utilizing these resources to … polyploid genome evolution revealed by a pan-genomic analysis of Brachypodium hybridum and its diploid … Varoquaux, et. al.N. 2019 Transcriptomic analysis of field-droughted sorghum from seedling to …
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Forest Fungi, Seagrass, and a New View of Symbiosis
Three stories of JGI-supported research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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Meeting report: International soil virus conference 2024
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… more about BioSANS. Letters of Intent are due March 17, 2021 for the FICUS proposal call. Q&A from the Webinar: … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene … & Microbiomes ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined … with nearly 5,000 publicly available ones and 1,100 metagenome-assembled genomes (MAGs) reconstructed from …
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JGI@25: Using Team Science to Build Communities Around Data
… of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these …
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An Integrated Dataset to Understand Ecosystem Interaction
… chemistry offers insights into how these ecosystems cycle nutrients like nitrogen and carbon, as well as improving the … is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by the U.S. … Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic …
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