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Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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Microbial communities associated with sympagic and planktonic habitats during a polar vortex influencing the North American Great Lakes Basin
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… displacing these important cold-water communities of algae with warm-adapted ones, a trend that threatens to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … RNA transcripts. All sequencing was done through the JGI Community Science Program . Using an ecology metric called …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… For more than a decade, researchers around the world have collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Taking Stock of the Known and Unknown Microbial Space
… microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science Advances , … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out …
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JGI-KBase Panel at SACNAS
… session will demonstrate to students (and their mentors) how to begin establishing a professional presence through … of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get credit for their contributions to science. A panel of DOE researchers, program managers, and …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was established to … viridis ). The team of researchers at the Danforth Plant Science Center (Danforth Center), HudsonAlpha and the JGI …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture … focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …
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