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Webinar: Introducing the BioSANS capability
Molecular Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the …
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From Competition to Cooperation
… lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader analysis than had ever been done … a large-scale comparison, charting several changes caused by the lifestyle change. For example, the number of plant …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. … (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University of Georgia and including … them in JGI’s fungal portal MycoCosm. … The work conducted by the US Department of Energy Joint Genome Institute, a DOE …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest … of California, Berkeley aims to redesign and engineer algae by identifying the algal regulators that could boost lipid … colleagues aim to understand how soil microbiomes in fire-adapted ecosystems respond to low and high severity …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … scientists to study microorganisms that can’t be cultured by analyzing and then extrapolating data obtained from … that are available these days and that are widely used by many, many scientists.”  Using samples of rumen-digested …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) hosted a pitch event promoting … for current faculty. Applying faculty members may invite up to two student participants from the faculty member’s home … for the DOE Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI DNA Synthesis Platform Ben Bowen and …
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JGI at the AGU Fall Meeting
… unless otherwise noted): December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating … Successful Proposals December 9  4:15pm PT (online) Town Hall on how the Facilities Integrating Collaborations … through a single research proposal: Maximize Your Research by Harnessing Multiple Scientific User Facilities in One …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley … to reconstruct and model gene regulatory pathways used by the filamentous fungus  Neurospora crassa, and to …
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Yasuo Yoshikuni
Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, … and renewable chemicals, developing genome engineering tools for non-model organisms, modulating microbe-microbe … et al. Intersubunit Coupling Enables Fast CO2-Fixation by Reductive Carboxylases., ACS Central Science , 2022 …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the … application could scale,” says Mouncey. The JGI team has already demonstrated CRAGE as a versatile engineering system …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and … datasets from host-associated and environmental samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to joining the JGI, she was a Bioinformatics Program Fellow …
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Gene Expression: From On-Off Switch to Dial
Scientists have developed a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to … on, scientists can determine the level of gene expression by the gradations. The Impact Metabolic engineering could … characteristics in an organism. The experiment was led by Hal Alper, professor and associate chair at the …
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