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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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When “The Blob” Made It Hotter Under the Water
… event may foreshadow climate change impact on marine microbial communities. The Science A team of researchers … Blob.” The event was recorded during a long-term study of microbial communities in the northeastern subarctic Pacific Ocean. The Impact The microbial communities in the ocean drive the biological pump …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial Interactions Group who has mentored several of the … graduate intern): In her final year in the Quantitative & Systems Biology PhD program at UC Merced under the …
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Webinar: SIP technologies at EMSL and JGI
… can harvest the sample, then we can put it into the laser system 7. Q: Can radioactive isotopes be used at EMSL? A: … don’t have a great way to resolve root respiration from microbial processes, but we’re not mixing the tracer with … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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JGI Announces 2026 New Investigator Portfolio
… metatranscriptomics and genome assembly to investigate microbial and plant metabolism across diverse ecosystems — from Antarctic soils and Icelandic hydrothermal … including biological routes for critical minerals recovery, microbial pathways for high-value bioproducts, and …
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A Collaboration to Improve Plant Genome Annotations Across Species
… Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps in the …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… (Berkeley Lab) and the Laboratory for Research in Complex Systems (LRC) in Menlo Park, Calif. In the June 24, 2022, … in coastal sediments,” said Woyke, who also heads the JGI’s Microbial Program and is one of the article’s senior … level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab also used a labeling …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… Internship co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the … and a teaching assistant for the UC Merced Quantitative and Systems Biology department.   Jonelle Basso , a JGI research …
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MGM Workshop at Fisabio Summer School
… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is …
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OpenMSI Arrayed Analysis Toolkit: Analyzing Spatially Defined Samples Using Mass Spectrometry Imaging
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Arabidopsis Root Microbiome Microfluidic (ARMM) Device for Imaging Bacterial Colonization and Morphogenesis of Arabidopsis Roots
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JGI User Executive Committee Expands
… how these changes affect the dynamics and functioning of ecosystems. She leads a recently approved CSP New Investigator … decomposition. She’s also participated in the 1000 Fungal Genomes Project and has an interest in cross-disciplinary … her institution and Bioenergy Research Centers. Sogin is a microbial ecologist at UC Merced, where her group focuses on …
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