Results

Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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iPHoP: A Matchmaker for Phages and their Hosts
… microbial communities. One day, these phages could boost plant-microbe interactions, nutrient cycling, or carbon … pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, … it predicted many more likely hosts for viruses in human microbiome samples, reflecting factors such as the quality …
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Tanja Woyke
… postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont … metagenomics. Taking on a Research Scientist position in 2007, she switched gears from metagenomics to single-cell … into the Microbial Genomics Program Lead position in 2009 and assumed the Deputy Director of User Program …
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Ice cover extent drives phytoplankton and bacterial community structure in a large north‐temperate lake: implications for a warming climate
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Coral mucus rapidly induces chemokinesis and genome-wide transcriptional shifts toward early pathogenesis in a bacterial coral pathogen
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Proposal of Patescibacterium danicum gen. Nov., sp. nov. in the ubiquitous ultrasmall bacterial phylum Patescibacteriota phyl. Nov
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Codon bias, nucleotide selection, and genome size predict in situ bacterial growth rate and transcription in rewetted soil
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Amplicon sequencing of ice and water phytoplankton and bacterial communities during an extreme winter in a central Canadian great lake
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Introducing New Members of the JGI User Executive Committee
… reasons for wanting to serve on the UEC. Hatzenpichler, who studies sediment-dwelling archaea, expressed his interest in … phenotypes and genotypes. Pawlowska, who studies fungal-bacterial symbiotic systems, noted that she would like to … shaping the assembly of fungal endophytes across land plants and lichens, mentioned her interest in guiding JGI …
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