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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… called Chlamydomonas reinhardtii. We’re using an attentive deep learning model called Tabnet in order to perform …
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Uri Neri
… viruses – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be …
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Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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JGI & KBase at PAG XXVII
Changes during Leaf Senescence in  Populus 8:03 PM Natural Diversity in  Setaria  and a Novel Gene for Shattering   In …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …
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JGI@25: From Life at the Extremes to Editing Genomes
Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … Banfield is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine … Mountain, CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna …
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A Powerful Technique to Study Microbes, Now Easier
… to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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Tracking the Origins of Methane-Producing Microbes
… recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of … Following that work, they partnered once more with JGI Microbial Program head Tanja Woyke and her Single Cells team member Frederik Schulz to screen the microbial communities collected. The team noticed some of …
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Forming Scientific Connections and Building Community
W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein Bendall : “It’s great …
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JGI Earth Month: Wetlands Work in #TenHundredWords
Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science … Student Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane Production in …
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The Soil Blooms Green
… green growth appears on top of farmers’ fields: a microbial community that might be quietly improving the …
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