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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Boosting Small Molecule Production in Super “Soup”
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … paper is the first result of the collaboration with the JGI, where they are partnering with  Yasuo Yoshikuni and  … that we plan to offer to users in the near term,” added JGI Director  Nigel Mouncey . Hal Alper will be speaking on …
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A Community Resource for Secondary Metabolite Researchers
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as … from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed with two main objectives. First …
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Fungal Friends or Foes in Plant Roots
… determine if these fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Communications paper . The work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … are accessible on JGI data portals including the Integrated Microbial Genomes & Microbiomes (IMG/M) system, enhancing …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … diverse metabolic capabilities offer insights into how microbial processes might be harnessed for applications …
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Pinning Down a Piece of Photosynthesis
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … said Crysten Blaby-Haas, a research scientist at the JGI and Molecular Foundry, and the study’s senior author. In … these lines came from UC Berkeley professor and longtime JGI collaborator Sabeeha Merchant’s group. In 2011, they …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… functions. It plays an important role in regulating microbial cellulose production and biofilm formation, which … cyclic di-GMP in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic di-GMP controls microbial colonization, which can affect pathogenic and …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three … W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein Bendall : “It’s great …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC … was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. The sequences …
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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