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Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
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Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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Microbial communities associated with sympagic and planktonic habitats during a polar vortex influencing the North American Great Lakes Basin
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University of Queensland in … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the … as Adjunct Scientist at the Bigelow Laboratory for Ocean Sciences and as Associate Adjunct Professor at the …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, the  Genomes OnLine … repository, making curated microbiome metadata that follows community standards freely available, and enabling …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for … over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer …
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Understanding Wildfire Recovery, Starting in Soil
… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful … for User Science (FICUS) initiative . In this program, researchers leverage the capabilities of more than …
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Taking Stock of the Known and Unknown Microbial Space
… microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Biological and Environmental Research (BER) missions. The JGI provides integrated high-throughput sequencing and …
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At the nexus of three kingdoms: the genome of the mycorrhizal fungus Gigaspora margarita provides insights into plant, endobacterial and fungal interactions
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Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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