Results

Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … production of biofuels and renewable chemicals, developing genome engineering tools for non-model organisms, modulating …
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Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance
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In silico analysis of the expression profile of AA9 Lytic Polysaccharide Monooxygenases (LPMOs) and the CDH Cellobiose Dehydrogenase enzyme in wood-degrader Agaricomycetes. The Pleurotus ostreatus case
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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Georg Rath
… the JGI, he has been working on the boundary of life science and computational science with notable stops at … infrastructure in close collaboration with the local scientists. As the lead of the infrastructure team and the … people and transparency and a staunch supporter of open source development processes. This expresses itself in the …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … to culture these microbes in the lab. After joining the JGI, he formed the Microscale Applications group to operate … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in … binding sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His … DSM12444 transcription factors." Microbiology Resource Announcements 14, no. 8 (2025): e00260-25. Cassol, …
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Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species
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Forming Scientific Connections and Building Community
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates and seven … : ”I really enjoyed meeting and getting to know many of the scientists that work here.” Mentor: Lorenzo Aureli Project: … who were able to give me some guidance in my academic journey.” Mentors: Deze Kong & Yasuo Yoshikuni Project: “ …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… determination as they came onsite. From data carpentry to science communications, their schedules were filled with … skills, wet lab skills and overall connections. Theo Loureaux : I wanted to first discover new methods with tools … limited experience with, and to do so with some of the top scientists in that subfield.     Byline: Graham Rutherford …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She …
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