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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … Genomics Shared Resource. The work (proposal 10.46936/10.25585/60001289) conducted by the US DOE JGI …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … (MIMAG) of bacteria and archaea. Nature Biotechnol. 35, 725-731. Paez-Espino D, et al. 2016. Uncovering Earth’s …
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Green Algae Reveal One mRNA Encodes Many Proteins
… in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger RNA, which encodes a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Refining the Process of Identifying Algae Biotechnology Candidates
… place these algae in a container with access to sunlight, water and carbon dioxide so they can grow, and then harvest … have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) and produces the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The … These archaea fix carbon and nitrogen, but the viruses that infect Altiarchaea cause the cells to burst. This … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in his backyard in … resilience to warming . New Phytol. 2022 Jun;234(6):2111-2125. doi: 10.1111/nph.18072.   Byline: Ashleigh Papp …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy … (“sibling”) lineages Margulisbacteria and Saganbacteria that diverged from the bacterial tree before Cyanobacteria … of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett … his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student … Program (CSP) proposal, and Rambo’s research builds on that. “The purpose of this CSP is to better understand …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) … One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … the University of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander Probst, …
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