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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … genomes, but unfortunately there are not many available to study. This is because most fungal clades have no reference … These programs are resources designed to prepare early career researchers with real world science skills and …
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Four Researchers Join JGI User Executive Committee
… of Energy user facility located at Lawrence Berkeley National Laboratory. Holly Bik of the University of Georgia, … data and expertise to the global research community to study complex biological and environmental systems. The … in the UEC, Bik aims to serve as an advocate for early-career scientists and unconventional sample types such as …
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Crysten Blaby-Haas
… University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and reverse … in metal homeostasis. She began her independent research career at Brookhaven National Laboratory (2015) where she …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint … a variety of tools that leverage stable isotopes to measure carbon and nutrient flux, and identify microbes assimilating … time has been impacted by the pandemic. 3. Q: What instrument / method does the JGI use to pre-screen DNA for …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a … soil. These fungi help shape a forest’s ecology. They store carbon and cycle key nutrients like nitrogen and … Remarkable Similarity Despite Vast Diversity For this study, researchers collected soil samples from four sites: …
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Jasmyn Pangilinan
… tools and analysis support for user science, with a focus on metagenomes. Passionate about automation and collaboration, she works to …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … Community Science Project proposal with JGI, in which she’s studying a special kind of plant metabolism. This … are open, it’s the same pore in the leaf through which carbon dioxide enters the leaf for photosynthesis.  ALISON:  …
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their … Polyploid Genomes in a Pan-genomic Context For the study, partly enabled by the JGI’s  Community Science … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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JGI-UC Merced Interns Share Their 2021 Experiences
… JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional development … experience, while others further along in their academic career enjoyed the chance to develop new skills needed for … Evolution of the Mitochondria Internship …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c … us to assess CRAGE’s impact, including how this application could scale,” says Mouncey. The JGI team has already … JGI collaborator Jeffery Dangl at the University of North Carolina at Chapel Hill, using CRAGE-Duet to engineer  …
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Making a Lichen Together
… clearly. The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … transferring part of its photosynthetically fixed carbon to the mycobiont. However, despite a … hundreds of microalgae are able to partner to form lichens. Studying the symbiosis by investigating a lichen’s genomes …
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