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… representatives of deep subsurface ecosystems. A team of researchers described how the viruses repeatedly attempted … attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help … identified. The JGI researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst …

Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …

Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … and inclusion in the sciences, among the interns were two undergraduate students and two graduate students from UC Merced. Cristhian Gutierrez …

Harnessing BER-funded data resources, researchers built an interactive and … Fermentation Explorer ( GitHub ) with a series of large datasets. One test was to predict traits of more than 400 … of five previously uncharacterized prokaryotes, including two bacteria isolated by their lab. KBase was used to …

… along with its life cycle. For most bacteria, their DNA floats freely within the cytoplasm of their cells. This newly discovered species of bacteria keeps its DNA more … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the journal Science. It … that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over … that are still vital to facilitate the assembly of small DNA fragments into larger and coherent pieces called contigs …

… roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help determine … isolates from the collection. The team then compared this dataset against nearly 80 previously published fungal … Fungi in plant roots: friends, enemies or frenemies? … Datasets … From our partners … Behind the Paper …