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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … a powerful generative model  now available to the global research community able to not just analyze but also create … machines. It has been applied in a variety of industries, from the health care to the financial sector — whether to …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy Joint Genome … to see what research is like at JGI. After graduating from UC Merced, this experience will help them direct their …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of … yet much of it remains unknown. For more than a decade, researchers around the world have collaborated with the U.S. … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA has been …
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Fungal & Algal Program User Advisory Committee
… The Fungal & Algal Program Advisory Committee is chartered by the Science Program Heads and report back to them. The Committee is chartered to …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple microbiology and ‘omics … interactions. Using metagenomes recovered directly from environmental samples and cultivated microbes, … This work was supported by the Australian Research Council …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits … ripples through the trees in his backyard. Originally from northern California and one of the first students to … colonize the roots of sphagnum work to transfer their thermotolerance abilities. This capacity to survive elevated …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural … Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main … a Research Scientist position in 2007, she switched gears from metagenomics to single-cell genomics, which is now her …
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Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after … picture of how burned ecosystems return to health, researchers have taken a look at microbial genomes across a … team of researchers collected soil samples from a wildfire that burned at the Colorado-Wyoming border, …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April … to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a … (Try it yourself  here .) She translated her abstract from a 2019 conference. Both versions appear side-by-side …
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Science Programs
… The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to … Prospective users are encouraged to reach out to program heads with questions on opportunities to partner with the … Deputy of Science Programs …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett … at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of … At the JGI, Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with …
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