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Common Ancestry and Novel Genetic Traits of Francisella novicida-Like Isolates from North America and Australia as Revealed by Comparative Genomic Analyses
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Comparative genomics reveals insights into characterization and distribution of quorum sensing-related genes in Shewanella algae from marine environment and clinical sources
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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Taking Stock of the Known and Unknown Microbial Space
… hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research … regulating global nutrient cycles. The information gained from understanding the interactions between microbes, hosts, …
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Microbial Genomics & Metagenomics (MGM) Workshop
… designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for … data with existing bioinformatic methods to bridge the gap from sequence to biology. …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … Horonobe Underground Research Laboratory, Hokkaido, Japan. From samples of both environments, they used fluorescence  … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome …
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Fungus Fuels Tree Growth
… matter, or as an endophyte, living between a plant’s root cells. The fungus is almost always found among and within … of Florida collected forest samples of poplar and soil from Washington and Oregon. The cuttings included genotypes … Program in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users … a template — integrative analysis of multiple omics data from various environments — that JGI users can leverage to … salt triggers this metabolic shift, the team combined RNA sequencing across multiple time points with Cappable-seq, a …
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Nigel Mouncey
… 27-year history. He has a wealth of managerial experience from almost 20 years in the Industrial Biotechnology private … the highest quality operational effectiveness of production sequencing, provides health and safety oversight at the JGI, … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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Emiley Eloe-Fadrosh
… focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to joining the … 37:29. Bowers et al. 2017. Minimum information about a single amplified genome (MISAG) and a metagenome- assembled …
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Type IV Pili‐Associated Secretion of a Biofilm Matrix Protein From Clostridium perfringens That Forms Intermolecular Isopeptide Bonds
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Webinar: SIP technologies at EMSL and JGI
… Mass Spectrometry, NanoSIMS, and other techniques. Q&A from the Webinar: 1. Q(uestion): How much DNA is required … go from start to finish, i.e., QC to separation to library sequencing and assembly. Like others, our turnaround time has been impacted by the pandemic. 3. Q: What instrument / method does the JGI …
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