Results

A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the … and functional capabilities. Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a means …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
The  National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … This NEON-focused webinar complements a  recent webinar co-hosted by the JGI and EMSL inviting researchers to apply for …
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching …
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Extracting the Secrets of Secondary Metabolites
CRAGE-CRISPR combo helps further demystify biosynthetic gene … survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … CRAGE, researchers are no longer limited to using model host microbes; theoretically, any microbe can serve as the …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into … gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) … Seattle, Washington.   Topics will include:  environmental microbiomes biodesign and synthetic biology AI/ML-enabled … to stay informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS … for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … gene functions that may be relevant to both algae and land plants.  Within the biogeochemistry group, one of the four …
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