Results

Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted … Interns Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK … and mentors Igor Grigoriev and Bishoy Kamel, A Comparative Analysis of Metabolic Pathways in Fungal Pathogens Shayna …
Learn more
Complete plastid genome sequences suggest strong selection for retention of photosynthetic genes in the parasitic plant genus Cuscuta
Learn more
Expression and regulatory asymmetry of retained Arabidopsis thaliana transcription factor genes derived from whole genome duplication
Learn more
Expanding standards in viromics: in silico evaluation of dsDNA viral genome identification, classification, and auxiliary metabolic gene curation
Learn more
Methylphosphonate Degradation and Salt-Tolerance Genes of Two Novel Halophilic Marivita Metagenome-Assembled Genomes from Unrestored Solar Salterns
Learn more
The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes
Learn more
Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach
Learn more
Simple and Rapid Site-Specific Integration of Multiple Heterologous DNAs into the Escherichia coli Chromosome
Learn more
Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning
Learn more
Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single … support, how much help can users expect for data analysis of the different omics analysis? Are users expected … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
Learn more
2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 … and then use computational tools to analyze biosynthetic gene clusters and then develop them for a range of … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
Learn more
Accelerating Metagenomics Discoveries with Deep Learning
Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 … rather than single cells or isolated strains, is easy to generate, but difficult to assemble and interpret. The … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
Learn more