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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common …
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JGI Hosts GPU Hackathon in May
… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … scroll down to the Team Proposal tab to submit. For more information about the 2019 GPU Hackathons, go to:  …
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A Collaboration to Improve Plant Genome Annotations Across Species
Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … the gene function and add additional biological information. As I’ve said earlier, 16 to 56 percent of plant …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular … just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a … themselves can also be modified. The best-known example of a modified DNA base is a methylation of the base cytosine …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for … and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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Fishing for Novel Cellulose Degraders
… single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help …
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The Case for Conservation
… help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single set of chromosomes, are available. The genome assemblies …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the chemicals they need to survive. To fill in their …
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Better Genome Editing for Bioenergy
A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … it to the correct sequence to snip — but not all guides are effective. To ensure the gene editing tool will make the …
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