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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. … regulation is critical to ensuring genes vital for growth and survival across various environments are … transcription factors and even other organisms can fuel a deeper understanding of these transcriptional regulatory …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) hosted a pitch event promoting fully-supported summer …
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Introducing New Members of the JGI User Executive Committee
… new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six … of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist … la Recherche Scientifique (CNRS) in October and maintains a lab at Michigan State University. She aims to help overcome …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, Iceland
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Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park
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Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) … Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron … scientist at Los Alamos National Laboratory. With a background in fungal genetics and evolution, he helps manage the …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … States. They also provided multiple access points to the information. The team harnessed a community-science program to … do—can help researchers develop predictive watershed scale models to manage river ecosystems. One application for the …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect … & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able …
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Introducing New Members of the JGI User Executive Committee
… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa … of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who studies … analyzed use-restricted data without contacting the lab that generated that data,” he said in his candidate …
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David Goodstein
With a background in experimental and computational surface … and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to the Human Genome …
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