Results

Persistent memory as an effective alternative to random access memory in metagenome assembly
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NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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Individual genome assembly from complex community short-read metagenomic datasets
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Zhong Wang
… on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … genomics analysis to peta-bases, and enabling data-driven science. This is a group of computational biologists, … GPU, Cloud etc) and their applications in solving DOE’s most challenging problems. … PhD Cell Biology. Duke …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of those researchers send their samples in from afar, …
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Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis.
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Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes
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A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between the Methylococcaceae and the Methylophilaceae
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High-Throughput Metagenomic Technologies for Complex Microbial Community Analysis: Open and Closed Formats
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Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter”
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Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage
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