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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer … hosted three undergraduates and seven graduate students from UC Merced through their long standing internship …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … is part of another project led by Owen White at the University of Maryland, Baltimore. Both projects will build … is led by a team of highly experienced investigators from institutions including the University of Maryland and …
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JGI Hosts GPU Hackathon in May
Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … and the code owners will be able to get assistance from mentors and a team to port their code to a new … … Oakridge National Laboratory Hackathon … From our partners …
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David Goodstein
Dr. Goodstein held positions at Cornell, IBM, Utah State University, and semiconductor equipment manufacturer … focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to … Plant Genomics web portal. … BS in Physics, New York University, NY M.S in Physics, Cornell University, NY PhD in …
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JGI Interns at UC Merced Earn CAMP Merit Awards
As part of the ongoing partnership between DOE JGI and UC Merced to … in science and research, two undergraduate students from UC Merced recently had summer internships in Walnut … Undergraduate Research Symposium , held February 6 at the University of California, Irvine, Cristhian and Bryan were …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a … for Biotechnology; Phil McClean of North Dakota State University; Dan Rokhsar of the JGI; and Scott Jackson of the … the common bean’s nutritional value, providing anywhere from 10-30% of daily protein requirements. It is also an …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in … et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . 6(7):960-970. …
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JGI on the 2021 Highly Cited Researchers List
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … working in 21 fields appear on the list, and those from the JGI whose publications rank in the top 1% by … Additionally, working with Michelle O’Malley’s team at the University of California, Santa Barbara, he and his …
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An Integrated Dataset to Understand Ecosystem Interaction
… processes for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as … data set will help identify how different elements of the ecosystem interact and respond to changes in the … Summary The 27 samples studied by researchers came from two environments: natural forests and plantations …
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
Sciences and Engineering Division at King Abdullah University of Science and Technology (KAUST) in Saudi Arabia. …
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JGI Earth Month: Wetlands Work in #TenHundredWords
April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … relevant to living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student … (Try it yourself  here .) She translated her abstract from a 2019 conference. Both versions appear side-by-side …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and phytoplankton …
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