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Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary
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Genome Sequencing Suggests Diverse Secondary Metabolism in Coral-Associated Aquimarina megaterium
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Deciphering the evolution of flavin-dependent monooxygenase stereoselectivity using ancestral sequence reconstruction
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Section-level genome sequencing and comparative genomics of Aspergillus sections Cavernicolus and Usti
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Viruses Reprogram Cells into Different Virocells
… from The Ohio State University and the University of Michigan studying how virus infections cause significant metabolic changes in marine microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in … for User Science (FICUS) initiative through an award to MBD and MBS (#2582) and used resources at the DOE Joint …
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen … the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The purpose of this Workshop is to illustrate the expansion of this field and bring it to …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … Oh, the magical world of the cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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A Step Toward Controlling Soybean Rust
… world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  Phakopsora pachyrhizi … causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce … JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       …
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Robert Bowers
… Bob uses single-cell genomics and metagenomics to explore how microbes influence people and the environment. This includes … studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science … Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and … Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic …
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