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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Understanding Wildfire Recovery, Starting in Soil
… The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … across a spectrum of burned soils. By connecting microbial genes with functions useful for forest recovery, this study …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … Cone Snail  Californiconus californicus (and cone snails in general) outside of mostly anecdotal information,” Ul-Hasan …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at … view to developing a deeper understanding of sequence-based gene function. …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in … This work was supported by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to … 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work conducted by the …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … viruses (NCLDV) supergroup. The expansion of the diversity for large and giant viruses offered the researchers insights … more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, including …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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A Complex Confection Decoded: Sugarcane Reference Genome
… world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … in  Nature by an international consortium. With the genetic code of sugarcane, researchers were able to map the … at CIRAD was supported by the International Consortium for Sugarcane Biotechnology. The work at the Institute of …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the terpene synthase gene family across eucalypt lineages. The Science From the … Australia but is increasingly farmed in other countries for essential oil production. The recent assembly of two …
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Improving the Cacao Genome and Phytozome
… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest … more productive cacao plants and ensure there will be cocoa for chocolate tomorrow In 2010, a draft first genome of  … address some of the most pressing challenges of our time. For more information, please visit  …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … of the Institut Pasteur in France, the importance of methanogenesis and the presence of methanogens in nearly all types …
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