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Help from Citrus’ Bitter, Hardier Cousin
… annotating and analyzing the genome in order to find the genetic traits responsible for  P. trifoliata ’s hardiness, … Fred Gmitter, a UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors … Journal.  this study included the discovery of candidate genes that confer resistance to citrus greening disease. …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … environments without oxygen through a process called methanogenesis. Methanogenic microorganisms therefore play a … thought to be the only microorganisms capable of methanogenesis —  it’s the metabolic process these little makers …
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From Competition to Cooperation
… to white rot fungi. Additionally, some of the saprotrophic genes found in the mycorrhizal species, such as nutrient … starting with the first mycorrhizal genome sequence generated by the JGI more than a decade ago. Having these …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, including … expanded 10-fold from just 205 genomes, redefining the phylogenetic tree of giant viruses. Metabolic Reprogramming a … provide short- and long-term impact on host metabolism in general, or on host populations impacted by adverse …
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Toward More Efficient Artificial Photosynthesis
… carbon captured from the atmosphere in a process that generates energy. The MPI team ultimately aims to develop an … Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA Carboxylase/Reductase (ECR) … in a cell, from capturing and fixing carbon dioxide to generate multi-carbon compounds through a light-driven …
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New Research Sheds Light on Diversity in the Deep Sea
… conditions. They identified 511 new or recently discovered genera of bacteria and archaea. Many of the samples shared a high prevalence of genes involved in sulfur and nitrogen metabolism, as well as …
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Honey Bee Gut Microbiota Divvy Up Dinner
… — cupids of the plant world facilitating the remixing of genes in the next generation of flowering vegetation. In return for their … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… loss of cell walls and a complex pattern of evolution for genes related to eating plant compounds in both the oceanic …
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Building Sphagnum Genomic Resources
… and evolutionary genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and … species encode a sulfate reduction pathway, but also have genes for sulfide oxidation. The findings lead them to …
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Frederik Schulz
… . Camargo A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature Biotechnology . Schulz … academic achievements (2008) … Education … Selected Publications … Awards and Service …
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Kjiersten Fagnan
Opioid Epidemic: Determining the Epistatic and Pleiotropic Genetic Architectures for Chronic Pain and Opioid … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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JGI@25: Building a Better Bean
… was published online June 8, 2014 in the journal Nature Genetics . “Common beans are a major societal crop for those … 473-million basepair genome of the common bean, identifying genes related to disease-resistance, flowering time, … dicot,” Schmutz explained, meaning the plant’s reduced genetic diversity makes it easier to genetically manipulate. …
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