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Uri Neri is a computational biologist who spends his days wrangling … remembering to document his code. At JGI, he develops tools for viral discovery and analysis, with a particular fondness … viruses – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be …

… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa … of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who studies … fail to represent the needs of large parts of the user community. “Large sections of the community are either …

As warm-adapted microbes edge polewards, they’d oust … organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary … point to this fundamental observation of cold and warm microbial networks, and just how clear and stark the …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …

Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev Microbiol. 2021 … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …

Lawrence Livermore National Lab biologist Jennifer Pett-Ridge … to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots have made these experiments easier for scientists everywhere. …

Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational Genomics, and led the computational … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …

The JGI Engagement Webinar held November 5, 2020 (watch the  video … involved? How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …

Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of …

Learn more about MycoCosm, a data portal with over 2,000 … datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented by Igor Grigoriev, Steven …