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A special issue of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …

CheckV can help researchers assess virus sequence fragments and data … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … as carbon, nitrogen and sulfur are themselves regulated by viruses in their environments. Environmental DNA …

Uncovering associations between plant roots and fungi that can help or … host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … office building, its roots are akin to the ground floor lobby. People walking into the lobby have many reasons for …

Meta-omics datasets show that CRISPR-Cas systems determine … The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome …

Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … DGR could mutate the virus’ tail fiber proteins, and thereby allow them to embrace different cells. Since that …

… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … that keep microbes — and the enzymes that would be produced by microorganisms — out,” said JGI user/collaborator …

Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program … and I hope that this open-source platform will be utilized by researchers from a variety of disciplines who seek to …

The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome … research is very sentimental to me.” Mentors: Crysten Blaby-Haas & Bikash Shrestha Project: “ Detecting Isotope Bonds …

Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  … Brassicales Genome Initiative. Brassicales is represented by more than 4,700 species, and the proposal focuses on …

Researchers looked across many organisms to see that … characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … of the National Academy of Sciences bridges this gap, by tracing the evolution of a specific enzyme family called …

Gardeners and farmers around the country recognize that crop … crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … As  reported January 27, 2021 in  Nature , the team led by researchers at the University of Texas (UT) at Austin, …

Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … of Cell Identity as an R package … Education … Selected Publications … Software …