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Help from Citrus’ Bitter, Hardier Cousin
… never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  … JGI collaborator, are senior authors of the  recent study published in  The Plant Journal.  this study included the discovery of candidate genes that confer …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… to request the capabilities and expertise of both national user facilities in one research proposal.  Submit research proposals  here that … address challenges in the sourcing, recovery, and utilization of critical minerals and materials. The proposal … capabilities is free. The JGI supports remote users. Users conduct experiments in their own labs or collect field …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network of … samples and specimens per year. This NEON-focused webinar complements a  recent webinar co-hosted by the JGI and EMSL … Q:  Does NEON have or plan on collecting RNA samples from soil or surfaces for microbe-focused collections? A: Not at …
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Webinar: MycoCosm Tutorial
… about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from …
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Extracting the Secrets of Secondary Metabolites
… CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and CRAGE …
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Finding the Fermenters
… prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with … an interactive browser that allows other researchers to study the genomes and predict the metabolic abilities of … also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the …
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A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive … to have evolved from a parasitic interaction with their soil fungus host, Rhizopus microsporus . Researchers found … reliant on the continued presence of the bacteria. By studying the Rm-Burkholderia symbiosis model, the team was …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the … researcher Joseph Napier from the Juenger lab and computational biologist Paul Grabowski of HudsonAlpha … outline the questions they asked – and answered – in the study that recently appeared in the Proceedings of the …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Program was brimming with excitement and determination as they came onsite. From data carpentry to science communications, their schedules were filled with trainings … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant …
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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … I will spend the first four sharpening the axe.” In this study,  published in  Metabolic Engineering , a team of … if the gene is actually essential. Through the JGI’s  Community Science Program , the scientists thus set out to …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new genetic mapping … given species. These approaches don’t allow researchers to compare across very distant species that no longer mate to …
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