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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. … sharing.  Recently, researchers have been able to study both sides of this interaction up close, using RNA …
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QTL associated with resistance to cassava brown streak and cassava mosaic diseases in a bi-parental cross of two Tanzanian farmer varieties, Namikonga and Albert
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Examining the Relationship Between the Testate Amoeba Hyalosphenia papilio (Arcellinida, Amoebozoa) and its Associated Intracellular Microalgae Using Molecular and Microscopic Methods
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Frequently Asked Questions: Proposal Submission
… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types supported, sample/capacity limits, … The CSP and FICUS calls are open to both domestic and international applicants from any institution type and at …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a … and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious … (BGCs) in native hosts, the complexity of cloning and expressing a given BGC in various hosts, availability of …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new genetic mapping … in understanding wild populations is that tests to find associations between genotype – an organism’s genetic makeup …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is … SAR324 exist in so many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 … sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of …
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User Advisory Committees
… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s … values, which guide the relationships we nurture in our workplace and seek to establish with our … the JGI user community and is responsible for providing input and advice on JGI policies and practices that …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …
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Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants
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