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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful analysis of microbiome data that has changed our understanding of the microbiome and the microbial …
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CSP New Investigator Call
… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will … Proposers are encouraged to review the JGI’s sample requirements . Samples …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the … working to address some of the most pressing challenges of our time. For more information, please visit  …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … method can be  accessed here so that, Session said, other scientists can “follow a step-by-step process to apply it to … genes from all possible candidate ancestors are available. Our method clearly identifies the four subgenomes based on …
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Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
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Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance
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Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of Medicine … the Metagenome Science Program on their research are encouraged to schedule time with Emiley Eloe-Fadrosh . Click to …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … for non-model organisms, modulating microbe-microbe and plant-microbe interactions in various environments to …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data … complex biological and environmental systems. We optimize our service to the community through responsibly managing …
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A 5-enolpyruvylshikimate 3-phosphate synthase functions as a transcriptional repressor in Populus
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