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Mateus Fiamenghi
Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s …
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Antonio Camargo
Antonio’s research is focusing on the development of new methods for the identification and classification of Mobile Genetic Elements from metagenomic data.  Antonio's …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and …
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Jinghua Jenny Huang
Jenny is working on the display and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and files in various …
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Arianna Krinos
Arianna is an affiliate research who explores the effect of aquatic protistan taxonomy and genetic diversity on physiology and ecosystem functioning through a combination of transcriptomic, metatranscriptomic, and metagenomic …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her … data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy … Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … methods for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers … ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … to inform the engineering of stable, synthetic microbial communities to take advantage of their joint metabolisms. …
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Neha Varghese
Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … the Wang group has developed customized data analyses and software to enable “grand-scale” scientific projects. These …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base … themselves can also be modified. The best-known example of a modified DNA base is a methylation of the base cytosine …
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Ancient Algae Reveal Secrets of Plant Evolution
… land over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … to thrive outside aquatic environments. The Impact A deeper understanding of how plants adapted to terrestrial …
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