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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … to J.F.B.). The work ( proposal doi: 10.46936/10.25585/60000800 ) conducted by the U.S. Department of Energy …
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Progress Reports: 2002–2020
Progress Reports from the Joint Genome Institute.  … FY20 Progress Report … FY19 Progress Report … FY18 Progress … Report … FY12 Progress Report … FY11 Progress Report … FY10 Progress Report … FY09 Progress Report … FY08 Progress …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Metagenome Program
… technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, … the Program aims to unlock the fundamental principles that govern ecosystem processes. This research provides … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative …
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Complete genome sequence of Desulfobulbus propionicus type strain (1pr3T)
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Cell Extracts from Bacteria and Yeast Retain Metabolic Activity after Extended Storage and Repeated Thawing
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the tube look … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … organized. “The big surprise of the project was to realize that these genome copies that are spread throughout the …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
Phytozome workshop held during the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free … of Northwestern University describe a two-pronged approach that starts with engineered yeast cells but then moves out … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high … insects hover just above. Described as a “river of grass” that stretches some 580,000 square miles across southern …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions … the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … He also aims to detect structural similarities in proteins that low sequence identity may belie. The technology he’s …
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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