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A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … By deciphering the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results …

… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

The first time I did this internship in the summer of 2020, it was a time where the world literally stopped. …

Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene …

… in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … step, numerous genes for antibiotic resistance and secondary metabolism would have been incorrectly attributed …

Gary Trubl is finishing his PhD in Microbiology at The Ohio State University, co-advised by Drs. Virginia Rich and Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research …

A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and …

Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to …

Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the …

A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … and xylose — into fatty acids that could be used for renewable fuel. In fact, lipids can make up more than 90 …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … rivers covering 90% of the watersheds in the continental United States. They also provided multiple access points to … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University …