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Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops
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The Joint Genome Institute Offers Resources Beyond a Core Facility
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full … to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. polymorpha has been used as a … could help researchers better understand related genes in more complex plants that could be applied toward …
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Cracking the Secrets of the Diatom’s Shell
Mukhopadhyay and Steve Singer are harnessing the versatile bacterium Pseudomonas putida to break down biomass and help bring about a more sustainable, biobased economy. They conduct research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy …
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Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria
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Methylotrophy in the Mire: direct and indirect routes for methane production in thawing permafrost
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Cultivating Symbiotic Antarctic Microbes
… and ‘omics techniques to experimentally determine that Nanohaloarchaeota are symbionts, rather than free-living … are long-term biological interactions between one or more biological organisms. One hallmark of an obligate symbiont—entirely dependent on the other for required nutrients—is genome size. The obligate …
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Better Living Through Bioenergy
Mukhopadhyay and Steve Singer are harnessing the versatile bacterium Pseudomonas putida to break down biomass and help bring about a more sustainable, biobased economy. They conduct research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy …
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Four principles to establish a universal virus taxonomy
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Energy efficiency and biological interactions define the core microbiome of deep oligotrophic groundwater
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The core metabolome and root exudation dynamics of three phylogenetically distinct plant species
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