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… tools and analysis support for user science, with a focus on metagenomes. Passionate about automation and collaboration, she works to … reliability, thereby accelerating critical insights for the JGI User community. …

… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium …

… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative … analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user …

… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user …

… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …

… series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the … with the assembler program MetaHipMer2. Oak Ridge National Lab is home to two supercomputers — Summit and Frontier … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …

… edible grain. But there are some sorghum varieties, grown on marginal land with little water, which were developed …

… When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High … biology, Robert Evans and Jan-Fang Cheng in the Functional Genomics group took it upon themselves to mentor them. …

… sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …

… genomes in general, Jef Boeke, Weimin Zhang (NYU Langone Health) and Leslie Mitchell (Neochromosome) have worked … to replace yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, with some artistic endeavors along the …

… Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, …