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Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response
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Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential
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Analysis of amino acid substitutions in AraC variants that respond to triacetic acid lactone
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JGI at the AGU Fall Meeting
Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … “Microscopic time travelers: A finely tuned, time-resolved analysis of viral and microbial communities in the Erpe … controls of nitrous oxide pulses in rewetted forest soils: An integrated -omic and isotopic approach” 12:39pm …
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Ian Blaby
… strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at … genome editing by coupling Cre-lox and CRISPR-Cas9 systems. PloS one. 15: 11. 2020 Blaby & Cheng, Building a …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global … growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … perennial grass  Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into … candidate bioenergy feedstock crops such as sugarcane and sorghum. The  M. sinensis genome analysis explains the …
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Trent Northen
… to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … mass spectrometry approaches and model laboratory ecosystems (EcoFABs). … Trent Northen is the Metabolomics … bacterial polyphenol metabolism in an anoxic wetland soil. Nat Commun. 2021 Apr 29;12(1):1-6. …
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes
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Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
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