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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE RENEW … Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant microbiome. They also took part in many enriching …
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A pipeline for targeted metagenomics of environmental bacteria
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… Todd Anderson currently works to support understanding of plants, microbes and environmental communities that have … which researchers can access multiple DOE facilities with a single proposal. From the vantage point of JGI’s 25 years … “Nigel [Mouncey] and his team have continued that excellence.” Drell said that, during his time as program …
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Supporting Global Research into Actinomycetes
… The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … in soil and can be used as biocontrol agents and to promote plant growth. It is the largest genus within Actinobacteria … Otani is also a scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of …
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Matthew Kellom
… interested in the interactions between microbial life and environment, and using metagenomics to study these complex … Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Promoting the Power of Viral Metagenomics
… Since early 2020, people all over the world have been forced to confront the awesome power that viruses have to affect nearly every aspect of our daily lives.  But for researchers who study viruses that infect organisms much … in a sample that has been collected from any kind of environment you can think of – animal intestines (including …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and …
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Understanding Wildfire Recovery, Starting in Soil
… The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, … process carbon and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes … one DOE Office of Science National User Facilities in a single project. …
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A single-cell genomics pipeline for environmental microbial eukaryotes
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Comparative genomics of clinical and environmental Vibrio mimicus
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Virus-associated organosulfur metabolism in human and environmental systems
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow …
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