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… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … are available. The genome assemblies highlight the multiple advances in sequencing technologies applied to the … could lead to the discovery of genes that could be used for multiple biotechnological applications. These applications …

… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … Many plants, sugarcane included, are polyploid and have multiple copies of chromosomes. Sugarcane accounts for 80% … and took more than a decade because there were pieces from multiple boxes, including some duplicates, to sort through …

… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 of Natural Prodcast. What you’re going to get here is the …

… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … to conduct comparative analyses across the genomes of multiple species in a single experiment. “Effectively, you … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… his code. At JGI, he develops tools for viral discovery and analysis, with a particular fondness for RNA viruses – … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … sorghum genomes. Deep sequencing and genetic linkage analysis improve the genome’s accuracy, and increase its …

DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy Joint Genome Institute (DOE JGI), a DOE Office of … start orientation as a first-year graduate student in the Quantitative Systems Biology (QSB) Group under the School of …

… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … with Marnix on putting that stuff together. It’s been kind of a theme, I think, in the last couple of conversations … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. …

… degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s … CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of these projects are large in scale and involve multiple collaborators, bringing together diverse expertise …

A preview of how large-scale single cell genomics complements … studies. The Science Researchers demonstrated the value of conducting large-scale single cell genomics by collecting … represented by enough single cell genomes to facilitate an analysis of within and between population heterogeneity by …

A special issue of Synthetic Biology celebrates research enabled by the JGI … One review article in the collection, Genomics-enabled analysis of specialized metabolism in bioenergy crops: … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …