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Visual Comparative Omics of Fungi for Plant Biomass Deconstruction
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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
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Evolution and comparative genomics of the most common Trichoderma species
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A parts list for fungal cellulosomes revealed by comparative genomics
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Comparative genomics of xylose-fermenting fungi for enhanced biofuel production
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Genome-scale phylogeny and comparative genomics of the fungal order Sordariales
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired … Noelle Anderson Class Year: At the time of the internship, 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has your summer internship …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … expanded genes for proteins requiring zinc. Co-expression analysis as well as laboratory culture experiments showed … latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of …
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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … at JGI and EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, … forward with density separation and fraction collection. 4. Q: Are there existing narratives, or plans to develop …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been … lake for over 20 years, to understand how the freshwater ecosystem works.  So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … groups of fungi. The 1KFG project has brought together over 400 proposal collaborators and co-authors with affiliations … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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