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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The Science If … from The Ohio State University and the University of Michigan studying how virus infections cause significant …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? … August 26, 2021, in Nature Communications , researchers led by Hal Alper at The University of Texas at Austin and … the yeasts received fine-tuning of gene expression through genetic rewiring with CRISPR-Cas9 that enhanced their …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back at the JGI’s … Kuhn in his 25th Anniversary presentation. “Those driven by new tools and those driven by new concepts.” Patrinos … in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in 2018. …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. Researchers demonstrated the …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… group at Berkeley Lab created a fabricated ecosystem – an EcoFAB. These small plastic growth chambers let researchers … compare their work consistently. And EcoFABs also work well in the classroom. This episode, we visit Los Medanos Community College to see EcoFABs in action in Jill Bouchard’s BIO 21 lab course. …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of … coast of south Texas. At the JGI, Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have … for her work on CRISPR-Cas9, technology described by the Nobel Foundation as having “a revolutionary impact on … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on … model of how marine microbial communities are affected by warming events. More time-series studies could help … instances of extreme weather events such as hurricanes and droughts. Another one began in late 2013, when a large patch …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University of Georgia and including …
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JGI on the 2020 Highly Cited Researchers List
Researchers at the JGI! They are among those recognized by Clarivate Analytics as “true pioneers in their fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by …
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