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Haplotype‐resolved genome assembly of Populus tremula × P. alba reveals aspen‐specific megabase satellite DNA
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Draft genome assembly and annotation of Haematococcus lacustris strain Liv1, an industrial astaxanthin-producing microalga
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day … upstream and downstream, which is how the EPA, it’s one of the indices they use for stream health, they look at … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome … (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the … ASM Microbe Meeting in Los Angeles, Calif.  Roux is also one of the lead organizers of the Viral EcoGenomics & …
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Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome
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JGI@25: From Life at the Extremes to Editing Genomes
… The collaboration has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences … Lawrence Berkeley National Laboratory (Berkeley Lab). And one of the tools that researchers can apply to study the … could be useful for industrial biofuel production, and multicellular development. “DAP-Seq is the main source of …
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes
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Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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