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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the … to identify over 27,000 microbial genes. The data from that study is now used across California State University … the chair of the JGI User Executive Committee, on how that study went from the lab to the classroom. …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … confirmation bias, because it enables scientists to study how methanogenesis takes place in the context of the … without some kind of test to even look if these genes are expressed, you have to be very agnostic and very careful,” …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … provide an overview of the bacterial, archaeal and microeukaryote diversity cataloged and taxonomically classified to … Schulz,  New Lineages of Life Lead Emiley Eloe-Fadrosh, Metagenome Program Tanja Woyke, Microbial Program Robert …
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Cultivating Symbiotic Antarctic Microbes
… in environmental processes (related to interactions of soil-sediment environments, water and air-atmosphere with … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples … The researchers then pursued the Nha-C strain for further study, tagging the cells with individual fluorescent probes. …
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JGI Earth Month: Wetlands Work in #TenHundredWords
Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … and metabolism, work on which she is expanding with her study of microbes in California’s manmade water transport … United States, and is working to address some of the most pressing challenges of our time. For more information, …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? … of sustainable chemical products,” said Jewett, one of the study’s senior authors. “But this has been done most … (BDO). To do so, the yeasts received fine-tuning of gene expression through genetic rewiring with CRISPR-Cas9 that …
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Three Join the JGI User Executive Committee
… of the University of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go … is a staff scientist at PNNL and thrust lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the … in how microbes influence biogeochemical cycles in soils and sediments and plant-microbial interactions in …
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Graduate Students Get Thesis Research Opportunity at the JGI
Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … are developing cutting edge technologies to answer our most pressing problems. I’m very much looking forward to working … and metabolism, work on which she will expand with her study of microbes in California’s manmade water transport …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
… to extreme environments, Marike Palmer and Brian Hedlund study organisms living in hot springs. Hear how their recent work revealed more …
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Corals in Hot Water Get Help From Their Microbes
As waters warm due to climate change, corals are in mortal peril. But corals comprise multiple organisms: a … When warm waters stress corals, it might be their microbes, including their photosynthetic partner, that help them take the …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold vast potential for … communities around these vents survive in very hot, high-pressure and chemically-rich ecosystems. This means they … Laboratory, contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more …
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Waiting to Respire
… development of multicellular organisms. Not all bacterial lineages harnessed aerobic respiration when the Cyanobacteria … fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, … The research teams opted to collaborate on a single study, with Matheus Carnevali and Schulz sharing co-first …
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