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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic … rot ( Serpula lacrymans ) is so destructive in houses. A study involving six brown rot fungi reveals the genomic … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … automated aspects of a commonly-used process for studying microbial communities, with results published in … labor and improve results. Applying this method to the study of a particular fungi, researchers identified novel …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have … (affectionately known as “Chlamy” to those who study it) a powerful reference organism for studying … on green algae. “The Chlamy genome launched over a dozen of new Chlamydomonas genome-related Community Science Program …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics … your Tree ever differ from NCBI Taxonomy? A(nswer): If you find that our trees are incorrect or need to be changed, … trees are based upon? A: This is still work in progress as new genomes are being added. We do plan to publish the tree …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … Remarkable Similarity Despite Vast Diversity For this study, researchers collected soil samples from four sites: …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … of rapidly growing plants whose biomass can be renewably converted into energy or biofuels. Although a member … history and perennial lifecycle makes it important to study directly. The large and complex genome of M. sinensis …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility … data and expertise to the global research community to study complex biological and environmental systems. The … are regular participants of the JGI annual user meeting and New Lineages of Life symposia. Bik is a recipient of the …
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Tomas Tyml
… cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding of the roles these associations play in the evolutionary …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal … were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of … is typically observed, but to the “TACK” superphylum,” said study first author Bojk Berghuis. “This provided us with …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment … DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – has advanced their work on the … address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics … user community inputs. We also have the potential to create new EcoGroups – reach out to us. 3.  Q: Can you use NCBI … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special … of the bacteria potentially holds the key to discovering new antiviral medicines and treatments for infectious … a public platform built on the knowledge of researchers studying actinomycetes and the focus of a  recent paper …
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