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Genome Sequence of Thermotoga sp. Strain RQ2, a Hyperthermophilic Bacterium Isolated from a Geothermally Heated Region of the Seafloor near Ribeira Quente, the Azores
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Single mutation at a highly conserved region of chloramphenicol acetyltransferase enables isobutyl acetate production directly from cellulose by Clostridium thermocellum at elevated temperatures
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Though visible to the naked eye, microscopy reveals unexpected complexity … DNA more organized. “The big surprise of the project was to realize that these genome copies that are spread throughout … symbionts in sulfur-rich mangrove sediments not far from his lab when he first encountered the bacteria. “When I …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… vigilant stewardship as JGI’s Operations Deputy has come to a close as this previously retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has … called on in the move to the new building where that was really critical. It takes a really special person to be able …
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Annotation of metagenome short reads using proxygenes
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Zhong Wang
… group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up genomics analysis to peta-bases, and enabling data-driven science. This is a … technologies (NanoPore, GPU, Cloud etc) and their applications in solving DOE’s most challenging problems. … …
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Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring
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Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1T, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … world of the cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to … Since one of the challenges of developing alternative fuels from plants is the high cost and resource requirements of …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces … When they tested the screen method on a microbial community from geothermal hot springs, they uncovered a novel … microbial enzymes, which could have a plethora of potential applications to industrial processes. Summary JGI …
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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