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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the resources and disciplines advanced by the JGI, we seek to inspire more students to enter the science, …
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Zhong Wang
… on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … genomics analysis to peta-bases, and enabling data-driven science. This is a group of computational biologists, … GPU, Cloud etc) and their applications in solving DOE’s most challenging problems. … PhD Cell Biology. Duke …
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MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment
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T-Toxin Virulence Genes: Unconnected Dots in a Sea of Repeats
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
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Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes
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Complete Genome Sequence of the Thermophilic Bacterium Exiguobacterium sp. AT1b
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Counting dots or counting reads? Complementary approaches to estimate virus-to-microbe ratios
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Origins and Recombination of the Bacterial-Sized Multichromosomal Mitochondrial Genome of Cucumber
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Neha Varghese
Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced …
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