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Institutional User Agreements
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Plant-Microbial Interactions Group
Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host metabolism, gene …
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Natural Prodcast Episode 3: The Primer, Part 3
… able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less … biology perspective, like if you have a cluster of genes, why can’t you just engineer you know, a promoter or an …
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Frequently Asked Questions: Proposal Submission
… for advice!      … The deliverables can range from raw sequence data to well-annotated assembled genomes to … listing of approved proposals can be found here. All sequence data will be accessible on the JGI Data Portal.   … … the CSP and FICUS programs? … How much will it cost me to sequence or synthesize my target or obtain metabolomics …
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Secondary Metabolites Program
… computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, … of horizontal gene transfer. … The SMC provides complete sequence and annotation data for secondary metabolite … and the public, and provide programmatic access to all sequence and annotation data and their comments. … JGI …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  … sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple …
Learn more
Natural Prodcast Episode 9: Roger Linington
Apple Podcasts or wherever you’re getting this and tell me why you’re listening. DAN: But, now, here’s Natural Prodcast … by the National Institutes of Health. DAN:  All right, why don’t you tell us a little bit about that. ROGER:  Yeah, … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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Honey Bee Gut Microbiota Divvy Up Dinner
Gilliamella  primarily degrades pectin. But not all strains of  Gilliamella  are capable of pectin metabolism.  Bifidobacterium strains, on the other hand, are abundant in glycoside … is a division of labor by these bacterial groups. But why the strain variability? The authors think the reason may …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for which quality DNA has been provided by the team. These strains have been characterized physiologically and …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … in various shades of white. To researchers searching for sequences of RNA viruses in large data sets, their work may … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9T) and comparison to “Dehalococcoides” strains
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