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Frequently Asked Questions: Proposal Submission
… The deliverables can range from raw sequence data to well-annotated assembled genomes to … listing of approved proposals can be found here. All sequence data will be accessible on the JGI Data Portal. … How much will it cost me to sequence or synthesize my target or obtain metabolomics data? …
Learn more
Plant Microbial Interactions Group
… Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host metabolism, gene …
Learn more
A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple …
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Secondary Metabolites Program
… computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, … The SMC provides complete sequence and annotation data for secondary metabolite … and the public, and provide programmatic access to all sequence and annotation data and their comments. …
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups are built? … good to cluster together similar genes in different strains or related species. 21.  Q: How can we select & …
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First Monoploid Reference Sequence of Sugarcane
… and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of modern, … sets of chromosomes to produce a monoploid reference sequence. For the highly polyploid sugarcane, an … has successfully assembled a first monoploid reference sequence using a targeted approach that focused on the gene …
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Environmental Genomics Group
… Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of … Profile HMM search across all IMG metagenomes, capturing sequence diversity for proteins of interest. … better understanding of complex ecosystems within hard to sequence and assemble samples, such as those from soil and …
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Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9T) and comparison to “Dehalococcoides” strains
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Complete genome sequence of Paenibacillus sp. strain JDR-2
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Draft Genome Sequences of 10 Strains of the Genus Exiguobacterium
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Complete genome sequence of Thauera aminoaromatica strain MZ1T
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Complete genome sequence of Desulfurispirillum indicum strain S5T
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