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Microbiome Data Science Team
… al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … Commun. 7:10476 Varghese NJ,  et al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 Kyrpides NC et …
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Draft Genome Sequences of Three Monokaryotic Isolates of the White-Rot Basidiomycete Fungus Dichomitus squalens
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CSP New Investigator Call
… the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals …
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A Collaboration to Improve Plant Genome Annotations Across Species
… updateable transcriptome resource spanning diverse plant species. It was developed to improve plant genome … Schmutz is the Plant Program Lead at the JGI. Sarah:  Why is a resource like this important to the field of plant … comparable study, where plants were subjected to three nitrogen sources (urea, ammonium, and nitrate) as the …
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JGI Portals
… and annotation of all publicly available genomes from three domains of life, in a uniquely integrated context. … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … M. sinensis and a tetraploid M. sacchariflorus , another species of Miscanthus that was sequenced. Understanding the …
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Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan
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Three founding ancestral genomes involved in the origin of sugarcane
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Construction and comparison of three reference‐quality genome assemblies for soybean
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Genomic Characterization of Methanomicrobiales Reveals Three Classes of Methanogens
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Insights into bilaterian evolution from three spiralian genomes
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Three mutations repurpose a plant karrikin receptor to a strigolactone receptor
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