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Partnerships: Adopt-A-Genome
… in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … M. sinensis and a tetraploid M. sacchariflorus , another species of Miscanthus that was sequenced. Understanding the …
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Microbiome Data Science Team
… al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … Commun. 7:10476 Varghese NJ,  et al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 Kyrpides NC et …
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Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan
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IMG Group
… and ANI values, we were able to ascertain mis-assignment of species names in genomes spanning nearly 18% of all existing species. Additionally, the complete linkage clustering made … distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists …
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Institutional User Agreements
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … to contain the RdRP sequence. The work resulted from a three-way collaboration that began in 2019, recalled Uri … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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Insights into bilaterian evolution from three spiralian genomes
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Three founding ancestral genomes involved in the origin of sugarcane
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Construction and comparison of three reference‐quality genome assemblies for soybean
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Genomic Characterization of Methanomicrobiales Reveals Three Classes of Methanogens
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Long-Term Persistence of Three Microbial Wildfire Biomarkers in Forest Soils
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