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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … of certain types of data to support their use by those generating data. The JGI Data Policy applies to research … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …
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Meeting Code of Conduct
… staff of the JGI events are required to adhere to the following Code of Conduct. Event organizers will enforce this Code … are expected to be familiar with this policy. Our aim in hosting an event is to build a stronger community. Our … they seem inconsequential. During this event or any of its related events, no participant should engage in harassment …
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The F-box protein gene exo-1 is a target for reverse engineering enzyme hypersecretion in filamentous fungi
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Frequently Asked Questions: Proposal Submission
… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review … from any institution type and at any career stage. Generally, most users are able to work with Berkeley Lab.  … for advice!      … The deliverables can range from raw sequence data to well-annotated assembled genomes to …
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Marine Microbe Contains Multitudes
SAR324 exist in so many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 … to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other …
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ATGC: a database of orthologous genes from closely related prokaryotic genomes and a research platform for microevolution of prokaryotes
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … and are exploring improvements to switchgrass through more targeted genome editing techniques to customize the crop for … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …
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Evolution of a Fungal Gene Expression Regulator
Describing the largest analysis to date of the modified DNA base … in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and … that unlike most flowering plants and animals, fungi lack gene body methylation. The analysis revealed that 5mC in …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and … (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … history and perennial lifecycle makes it important to study directly. The large and complex genome of M. sinensis …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint … Swift — verified that the fungi expressed biosynthetic gene clusters, which are “building blocks” of natural …
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Game On: High School Students Drive Everglades Metagenomics Study
… sampling in the Florida Everglades to help train the next generation of scientists. She shares her thoughts about the … do an environmental microbial community (metagenomic) soil study in an untouched region of the Everglades, the … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 …
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