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FICUS
… FICUS call with EMSL begin with a Letter of Intent (LOI) from a researcher, briefly describing the project … The ranked proposal list, along with a recommendation from management at the JGI and the other participating … for FICUS Research describes the resources available from all the facilities participating in the FY25 call, …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, … Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater … next 3 episodes are the story behind that giant assembly from Lake Mendota. In this episode: the software evolution …
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Fishing for Novel Cellulose Degraders
… When they tested the screen method on a microbial community from geothermal hot springs, they uncovered a novel cellulose-degrading bacterium typically found in low … co-assembled genome for a new genus level member of the novel candidate phylum Goldbacteria. They’ve proposed the …
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Secondary Metabolites Program
… interactions with their environments and with each other, from defending against predators to aiding in symbiotic … broader goal of enhancing biotechnological applications, from biofuel production to improving the resilience and … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, …
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Digging into Microbial Ecosystems Deep Underground
… have many questions about the microbial communities deep underground, and before the pandemic, they took the JGI …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… and shipping; JGI will handle all subsequent processing from that point. JGI provides users with various outputs … publicly available. If you're requesting DNA synthesis from JGI, there's also a material transfer agreement that’s … project with Molecular Foundry once you have what is needed from JGI.   …
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Genomic variation and biogeography of Antarctic haloarchaea
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Metatranscriptomic Sequencing of Winter and Spring Planktonic Communities from Lake Erie, a Laurentian Great Lake
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered the … this project. But every part of this project depends on lakewater samples — so this episode is a look at how …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an … work shows that anaerobic fungi might be a new source of novel compounds to help bolster the bioeconomy. Summary A … finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint …
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Frequently Asked Questions: Project Management
… The majority of JGI projects come from the user community. Find out about JGI’s calls for … the JGI User Agreement will be an authorized representative from your institution (usually a legal counsel … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? …
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